Biotimylated

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SDSC Summer Institute Wrapup

August 15, 2015

Tim and Gordon What would you do with 2 petaflops of processing power? It’s not an idle question: NSF’s XSEDE infrastructure offers researchers access to large-scale computing resources. I spent the last week at the San Diego Supercomputer Center, which hosts an annual Summer Institute to introduce scientists from many disciplines to high-performance computing technologies. Tissue engineering doesn’t have a lot of petascale problems but I did learn a lot about tools that can help me write more performant code on single and multi-processor systems—even in Python, my favorite programming language. ~And~ I got to take a selfie with a supercomputer.

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Building a temperature data logger on the cheap

September 28, 2014

I needed an accurate and inexpensive temperature logger to calibrate our stage incubator for live cell microscopy and make sure that it was stable over time, so I built one. This was a very quick project, using a $30 Dataq DI-145 data logger and a $4 epoxy-coated thermistor from Adafruit. (To power the thermistor from USB, which is safe and easy, add a micro-USB breakout board, a matching USB cable, and a small solderless breadboard for the complete package!)

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PIL, Cairo, and numpy

August 12, 2014

Here are the incantations you need to perform to create a Cairo surface from a grayscale image in a Numpy array, doodle on it, and convert the doodled-upon image back into a Pillow image so you can save it as e.g. a JPEG.

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Exploring the Mayday PAC FEC filings

July 29, 2014

I did a short analysis of Mayday PAC's July 2014 quarterly FEC filing (which doesn't include the final rush).

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Bike rides

May 27, 2014

I'm starting a list of nice bike loops around UCI, for "beginning to medium" cyclists like me. No gratuitous hills in there yet, but maybe I'll get bored of flat roads eventually!

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June 3 California Primary: Irvine and Judiciary

May 18, 2014

Finally to the end of the ballot!

There's only one race in Irvine, for a short-term seat on the Irvine Unified School District board.

There's a few judiciary elections. Judiciary elections are dumb. One of these races is important, though, because it offers a chance to get rid of Derek Johnson.

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June 3 California Primary: Orange County

May 11, 2014

Here’s what’s on my ballot for anything that isn’t municipal or judicial.

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